BNDatabaseGenerator.h

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/***************************************************************************
 *   Copyright (C) 2005 by Christophe GONZALES and Pierre-Henri WUILLEMIN  *
 *   {prenom.nom}@lip6.fr                                                  *
 *                                                                         *
 *   This program is free software; you can redistribute it and/or modify  *
 *   it under the terms of the GNU General Public License as published by  *
 *   the Free Software Foundation; either version 2 of the License, or     *
 *   (at your option) any later version.                                   *
 *                                                                         *
 *   This program is distributed in the hope that it wil be useful,        *
 *   but WITHOUT ANY WARRANTY; without even the implied warranty of        *
 *   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the         *
 *   GNU General Public License for more details.                          *
 *                                                                         *
 *   You should have received a copy of the GNU General Public License     *
 *   along with this program; if not, write to the                         *
 *   Free Software Foundation, Inc.,                                       *
 *   59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.             *
 ***************************************************************************/
#ifndef GUM_BN_DATABASE_GENERATOR
#define GUM_BN_DATABASE_GENERATOR

#include <agrum/BN/BayesNet.h>
#include <agrum/core/progressNotification.h>
#include <agrum/learning/database/databaseTable.h>
#include <fstream>

namespace gum {

  namespace learning {
    template < typename GUM_SCALAR >
    class BNDatabaseGenerator : public ProgressNotifier {
      public:
      // #######################################################################
      // #######################################################################

      BNDatabaseGenerator(const BayesNet< GUM_SCALAR >& bn);

      ~BNDatabaseGenerator();


      // #######################################################################
      // #######################################################################


      double drawSamples(Size nbSamples);   // drawSamples

      void toCSV(const std::string& csvFileURL,
                 bool               useLabels = true,
                 bool               append = false,
                 std::string        csvSeparator = ",",
                 bool               checkOnAppend = false) const;

      DatabaseTable<> toDatabaseTable(bool useLabels = true) const;

      std::vector< std::vector< Idx > > database() const;

      void setVarOrder(const std::vector< Idx >& varOrder);

      void setVarOrder(const std::vector< std::string >& varOrder);

      void setVarOrderFromCSV(const std::string& csvFileURL,
                              const std::string& csvSeparator = ",");

      void setTopologicalVarOrder();

      void setAntiTopologicalVarOrder();

      void setRandomVarOrder();

      std::vector< Idx > varOrder() const;

      std::vector< std::string > varOrderNames() const;

      double log2likelihood() const;


      private:
      const BayesNet< GUM_SCALAR >& __bn;

      Bijection< std::string, NodeId > __names2ids;

      Size __nbVars;

      std::vector< std::vector< Idx > > __database;

      std::vector< Idx > __varOrder;

      bool __drawnSamples = false;

      double __log2likelihood = 0;

      std::vector< Idx >
         __varOrderFromCSV(const std::string& csvFileURL,
                           const std::string& csvSeparator = ",") const;

      std::vector< Idx >
         __varOrderFromCSV(std::ifstream&     csvFile,
                           const std::string& csvSeparator = ",") const;

      // forbidden copies / moves
      BNDatabaseGenerator(const BNDatabaseGenerator&) = delete;
      BNDatabaseGenerator(BNDatabaseGenerator&&) = delete;
      BNDatabaseGenerator& operator=(const BNDatabaseGenerator&) = delete;
      BNDatabaseGenerator& operator=(BNDatabaseGenerator&&) = delete;
    };


#ifndef GUM_NO_EXTERN_TEMPLATE_CLASS
    extern template class BNDatabaseGenerator< double >;
#endif

  } /* namespace learning */
} /* namespace gum */

#include <agrum/learning/database/BNDatabaseGenerator_tpl.h>
#endif /* BN_DATABASE_GENERTOR */