28 #ifndef GUM_SHAFER_SHENOY_INFERENCE_H 29 #define GUM_SHAFER_SHENOY_INFERENCE_H 44 template <
typename GUM_SCALAR >
45 INLINE
static Potential< GUM_SCALAR >*
52 template <
typename GUM_SCALAR >
67 template <
typename GUM_SCALAR >
81 bool use_binary_join_tree =
true);
212 const NodeSet& declared_target)
final;
236 Potential< GUM_SCALAR >* (*__combination_op)(
const Potential< GUM_SCALAR >&,
237 const Potential< GUM_SCALAR >&){
374 const Potential< GUM_SCALAR >&,
const Potential< GUM_SCALAR >&));
413 #ifndef GUM_NO_EXTERN_TEMPLATE_CLASS Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
NodeProperty< const Potential< GUM_SCALAR > *> __clique_ss_potential
the potentials stored into the cliques by Shafer-Shenoy
aGrUM's Potential is a multi-dimensional array with tensor operators.
void _onAllJointTargetsErased() final
fired before a all the joint targets are removed
void _onEvidenceChanged(const NodeId id, bool hasChangedSoftHard) final
fired after an evidence is changed, in particular when its status (soft/hard) changes ...
FindBarrenNodesType __barren_nodes_type
the type of barren nodes computation we wish
void __setProjectionFunction(Potential< GUM_SCALAR > *(*proj)(const Potential< GUM_SCALAR > &, const Set< const DiscreteVariable * > &))
sets the operator for performing the projections
NodeProperty< GUM_SCALAR > __constants
the constants resulting from the projections of CPTs defined over only hard evidence nodes remove th...
JunctionTree * __junctionTree
the junction tree to answer the last inference query
void __collectMessage(NodeId id, NodeId from)
actually perform the collect phase
void _onEvidenceErased(const NodeId id, bool isHardEvidence) final
fired before an evidence is removed
static INLINE Potential< GUM_SCALAR > * SSNewmultiPotential(const Potential< GUM_SCALAR > &t1, const Potential< GUM_SCALAR > &t2)
__PotentialSet __marginalizeOut(__PotentialSet pot_list, Set< const DiscreteVariable * > &del_vars, Set< const DiscreteVariable * > &kept_vars)
removes variables del_vars from a list of potentials and returns the resulting list ...
void _onMarginalTargetErased(const NodeId id) final
fired before a single target is removed
Safe iterators for the Set classDevelopers may consider using Set<x>::iterator_safe instead of SetIte...
void _onMarginalTargetAdded(const NodeId id) final
fired after a new single target is inserted
Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
ArcProperty< bool > __messages_computed
indicates whether a message (from one clique to another) has been computed
Set< const Potential< GUM_SCALAR > *> __PotentialSet
void __setCombinationFunction(Potential< GUM_SCALAR > *(*comb)(const Potential< GUM_SCALAR > &, const Potential< GUM_SCALAR > &))
sets the operator for performing the combinations
const GUM_SCALAR __1_minus_epsilon
for comparisons with 1 - epsilon
Potential< GUM_SCALAR > * _unnormalizedJointPosterior(NodeId id) final
returns a fresh potential equal to P(argument,evidence)
void _onAllMarginalTargetsAdded() final
fired after all the nodes of the BN are added as single targets
NodeSet __roots
a clique node used as a root in each connected component of __JT
GUM_SCALAR evidenceProbability()
returns the probability of evidence
Class representing the minimal interface for Bayesian Network.
void _makeInference() final
called when the inference has to be performed effectively
Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
HashTable< NodeSet, const Potential< GUM_SCALAR > *> __joint_target_posteriors
the set of set target posteriors computed during the last inference
void _updateOutdatedBNPotentials() final
prepares inference when the latter is in OutdatedBNPotentials state
UndiGraph __graph
the undigraph extracted from the BN and used to construct the join tree
void _onStateChanged() final
fired when the stage is changed
Representation of a setA Set is a structure that contains arbitrary elements.
ShaferShenoyInference(const IBayesNet< GUM_SCALAR > *BN, FindBarrenNodesType barren_type=FindBarrenNodesType::FIND_BARREN_NODES, bool use_binary_join_tree=true)
default constructor
NodeProperty< EvidenceChangeType > __evidence_changes
indicates which nodes of the BN have evidence that changed since the last inference ...
FindBarrenNodesType
type of algorithm to determine barren nodes
NodeProperty< const Potential< GUM_SCALAR > *> __node_to_soft_evidence
the soft evidence stored in the cliques per their assigned node in the BN
HashTable< NodeId, NodeId > __node_to_clique
for each node of __graph (~ in the Bayes net), associate an ID in the JT
NodeProperty< const Potential< GUM_SCALAR > *> __target_posteriors
the set of single posteriors computed during the last inference
NodeProperty< const Potential< GUM_SCALAR > *> __hard_ev_projected_CPTs
the CPTs that were projected due to hard evidence nodes
void _onJointTargetAdded(const NodeSet &set) final
fired after a new joint target is inserted
bool __isNewJTNeeded() const
check whether a new join tree is really needed for the next inference
void _updateOutdatedBNStructure() final
prepares inference when the latter is in OutdatedBNStructure state
void setTriangulation(const Triangulation &new_triangulation)
use a new triangulation algorithm
const Potential< GUM_SCALAR > & _jointPosterior(const NodeSet &set) final
returns the posterior of a declared target set
<agrum/BN/inference/jointTargetedInference.h>
void _onAllTargetsErased() final
fired before a all single and joint_targets are removed
virtual void _onBayesNetChanged(const IBayesNet< GUM_SCALAR > *bn) final
fired after a new Bayes net has been assigned to the engine
ShaferShenoyInference< GUM_SCALAR > & operator=(const ShaferShenoyInference< GUM_SCALAR > &)
avoid copy operators
bool __is_new_jt_needed
indicates whether a new join tree is needed for the next inference
static INLINE Potential< GUM_SCALAR > * SSNewprojPotential(const Potential< GUM_SCALAR > &t1, const Set< const DiscreteVariable * > &del_vars)
SetIteratorSafe< const Potential< GUM_SCALAR > *> __PotentialSetIterator
void setFindBarrenNodesType(FindBarrenNodesType type)
sets how we determine barren nodes
void _onJointTargetErased(const NodeSet &set) final
fired before a joint target is removed
HashTable< NodeSet, NodeId > __joint_target_to_clique
for each set target, assign a clique in the JT that contains it
~ShaferShenoyInference() final
destructor
ArcProperty< __PotentialSet > __created_potentials
the set of potentials created for the last inference messages
Triangulation * __triangulation
the triangulation class creating the junction tree used for inference
Potential< GUM_SCALAR > margSumOut(const Set< const DiscreteVariable * > &del_vars) const
Projection using sum as operation (and implementation-optimized operations)
void __createNewJT()
create a new junction tree as well as its related data structures
Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
<agrum/BN/inference/ShaferShenoyInference.h>
void __diffuseMessageInvalidations(NodeId from, NodeId to, NodeSet &cliques_invalidated)
invalidate all the messages sent from a given clique
__PotentialSet __removeBarrenVariables(__PotentialSet &pot_list, Set< const DiscreteVariable * > &del_vars)
JoinTree * __JT
the join (or junction) tree used to answer the last inference query
Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
Base class for undirected graphs.
void __computeJoinTreeRoots()
compute a root for each connected component of __JT
void _onEvidenceAdded(const NodeId id, bool isHardEvidence) final
fired after a new evidence is inserted
<agrum/BN/inference/evidenceInference.h>
NodeSet __hard_ev_nodes
the hard evidence nodes which were projected in CPTs
bool __use_binary_join_tree
indicates whether we should transform junction trees into binary join trees
Copyright 2005-2019 Pierre-Henri WUILLEMIN et Christophe GONZALES (LIP6) {prenom.nom}_at_lip6.fr.
NodeProperty< __PotentialSet > __clique_potentials
the list of all potentials stored in the cliques
const Potential< GUM_SCALAR > & _posterior(NodeId id) final
returns the posterior of a given variable
Interface for all the triangulation methods.
const JoinTree * joinTree()
returns the current join tree used
EvidenceChangeType
the possible types of evidence changes
void _onAllEvidenceErased(bool contains_hard_evidence) final
fired before all the evidence are erased
void __invalidateAllMessages()
invalidate all messages, posteriors and created potentials
virtual const IBayesNet< GUM_SCALAR > & BN() const final
Returns a constant reference over the IBayesNet referenced by this class.
void _onAllMarginalTargetsErased() final
fired before a all the single targets are removed
Size NodeId
Type for node ids.
void __produceMessage(NodeId from_id, NodeId to_id)
creates the message sent by clique from_id to clique to_id
ArcProperty< __PotentialSet > __separator_potentials
the list of all potentials stored in the separators after inferences
const JunctionTree * junctionTree()
returns the current junction tree