aGrUM  0.20.3
a C++ library for (probabilistic) graphical models
graphChangesGeneratorOnSubDiGraph.h
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1 /**
2  *
3  * Copyright (c) 2005-2021 by Pierre-Henri WUILLEMIN(@LIP6) & Christophe GONZALES(@AMU)
4  * info_at_agrum_dot_org
5  *
6  * This library is free software: you can redistribute it and/or modify
7  * it under the terms of the GNU Lesser General Public License as published by
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9  * (at your option) any later version.
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12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  * GNU Lesser General Public License for more details.
15  *
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17  * along with this library. If not, see <http://www.gnu.org/licenses/>.
18  *
19  */
20 
21 
22 /** @file
23  * @brief The class for computing the set of graph changes (over a subgraph)
24  * transmitted to learning algorithms
25  *
26  * Structure learning algorithm try different modifications of the graph. Class
27  * GraphChangesGeneratorOnSubDiGraph provides a simple way to compute those that
28  * we wish to perform when we wish to limit the set of changes over a subgraph
29  *of
30  * the graph we learn. For instance, we may wish to relearn an already partially
31  * learnt structure just around nodes A,B,C. In this case, we can set the set of
32  * target nodes of the GraphChangesGeneratorOnSubDiGraph to {A,B,C} and the set
33  * of starting nodes as all the nodes of the graph. In this case, only the arcs
34  * whose heads are A, B or C will be trnasmitted to the learning algorithm.
35  *
36  * Basically, the idea is to use method setGraph at the beginning of the
37  * structure learning in order to initialize the possible set of operators.
38  * Then, parse this set using a for ( auto iter = operator_set.begin ();
39  * iter != operator_set.end (); ++iter ) loop and compute the scores
40  * induced by these changes. When this is done, flush the operator set by
41  * calling method clearChanges. Then iterate changes and after each new change
42  * applied, used again the iterator for loop, and so on. Note that, whenever
43  * you execute method modifyGraph, this will automatically flush the current
44  * list of changes and put into the list only the changes that are affected
45  * by the graph modification.
46  *
47  * @author Christophe GONZALES(@AMU) and Pierre-Henri WUILLEMIN(@LIP6)
48  */
49 #ifndef GUM_LEARNING_GRAPH_CHANGES_GENERATOR_ON_SUBDIGRAPH_H
50 #define GUM_LEARNING_GRAPH_CHANGES_GENERATOR_ON_SUBDIGRAPH_H
51 
52 #include <agrum/agrum.h>
53 #include <agrum/tools/core/OMPThreads.h>
54 #include <agrum/tools/core/set.h>
55 #include <agrum/tools/graphs/diGraph.h>
56 #include <agrum/BN/learning/structureUtils/IGraphChangesGenerator4DiGraph.h>
57 #include <agrum/BN/learning/structureUtils/graphChange.h>
58 
59 namespace gum {
60 
61  namespace learning {
62 
63  /** @class GraphChangesGeneratorOnSubDiGraph
64  * @brief The basic class for computing the next graph changes possible in a
65  * structure learning algorithm
66  *
67  * Structure learning algorithm try different modifications of the graph.
68  *Class
69  * GraphChangesGeneratorOnSubDiGraph provides a simple way to compute those
70  * that we wish to perform when we wish to limit the set of changes over a
71  * subgraph of the graph we learn. For instance, we may wish to relearn an
72  * already partially learnt structure just around nodes A,B,C. In this case,
73  * we can set the set of target nodes of the
74  *GraphChangesGeneratorOnSubDiGraph
75  * to {A,B,C} and the set of "tail" nodes as all the nodes of the graph. In
76  * this case, only the arcs whose heads are A, B or C will be trnasmitted to
77  * the learning algorithm.
78  *
79  * Basically, the idea is to use method setGraph at the beginning of the
80  * structure learning in order to initialize the possible set of operators.
81  * Then, parse this set using a for ( auto iter = operator_set.begin ();
82  * iter != operator_set.end (); ++iter ) loop and compute the scores
83  * induced by these changes. When this is done, flush the operator set by
84  * calling method clearChanges. Then iterate changes and after each new
85  *change
86  * applied, used again the iterator for loop, and so on. Note that, whenever
87  * you execute method modifyGraph, this will automatically flush the current
88  * list of changes and put into the list only the changes that are affected
89  * by the graph modification.
90  *
91  * @ingroup learning_group
92  */
93  template < typename STRUCT_CONSTRAINT >
95  public:
96  /// the iterator for parsing the list of possible graph change operators
97  using iterator = typename Set< GraphChange >::const_iterator;
98 
99  /// the const iterator for parsing the list of graph change operators
101 
102  // ##########################################################################
103  /// @name Constructors / Destructors
104  // ##########################################################################
105  /// @{
106 
107  /// default constructor
108  GraphChangesGeneratorOnSubDiGraph(STRUCT_CONSTRAINT& constraint);
109 
110  /// copy constructor
112  const GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT >& from);
113 
114  /// move operator
116  GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT >&& from);
117 
118  /// destructor
120 
121  /// @}
122 
123  // ##########################################################################
124  /// @name Operators
125  // ##########################################################################
126  /// @{
127 
128  /// copy operator
129  GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT >&
130  operator=(const GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT >& from);
131 
132  /// move operator
133  GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT >&
134  operator=(GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT >&& from);
135 
136  /// @}
137 
138  // ##########################################################################
139  /// @name Iterators
140  // ##########################################################################
141  /// @{
142 
143  /// returns an (unsafe) iterator on the beginning of the list of operators
144  iterator begin() const;
145 
146  /// returns an (unsafe) iterator on the end of the list of operators
147  const iterator& end() const;
148 
149  /// @}
150 
151  // ##########################################################################
152  /// @name Accessors / Modifiers
153  // ##########################################################################
154  /// @{
155 
156  /// returns the constraint that is used by the generator
157  STRUCT_CONSTRAINT& constraint() const noexcept;
158 
159  /// sets a new graph from which the operator will compute possible changes
160  void setGraph(const DiGraph& graph);
161 
162  /// assign a set of target nodes
163  void setTargets(const NodeSet& nodes);
164 
165  /// adds a new target node
166  void addTarget(NodeId node);
167 
168  /// removes a target
169  void eraseTarget(NodeId node);
170 
171  /// assign a set of "tail" nodes
172  void setTails(const NodeSet& nodes);
173 
174  /// assign a set of "tail" nodes from 0 to nb_nodes - 1
175  void setTails(Size nb_nodes);
176 
177  /// adds a new "tail" node
178  void addTail(NodeId node);
179 
180  /// removes a tail node
181  void eraseTail(NodeId node);
182 
183  /// notify the operator set of a change applied to the graph
184  void modifyGraph(const ArcAddition& change);
185 
186  /// notify the operator set of a change applied to the graph
187  void modifyGraph(const ArcDeletion& change);
188 
189  /// notify the operator set of a change applied to the graph
190  void modifyGraph(const ArcReversal& change);
191 
192  /// notify the operator set of a change applied to the graph
193  void modifyGraph(const GraphChange& change);
194 
195  /// empty the set of possible change operators that can be applied
196  void clearChanges() noexcept;
197 
198  /// notifies the generator that we have parsed all its legal changes
199  void notifyGetCompleted();
200 
201  /// sets the maximum number of threads used to compute the set of changes
202  void setMaxNbThreads(Size nb) noexcept;
203 
204  /// @}
205 
206  protected:
207  /// a reference on the structural constraint used to restrict the changes
208  STRUCT_CONSTRAINT* constraint_;
209 
210  /// the set of target nodes
212 
213  /// the tail nodes (other extremities than the targets)
215 
216  /// the current set of operators
218 
219  /// create the set of legal and illegal changes from a given graph
220  void createChanges_();
221 
222  private:
223 /// the max number of threads authorized
224 #if defined(_OPENMP) && !defined(GUM_DEBUG_MODE)
226 #else
228 #endif /* GUM_DEBUG_MODE */
229  };
230 
231  } /* namespace learning */
232 
233 } /* namespace gum */
234 
235 /// always include the templated functions
236 #include <agrum/BN/learning/structureUtils/graphChangesGeneratorOnSubDiGraph_tpl.h>
237 
238 #endif /* GUM_LEARNING_GRAPH_CHANGES_GENERATOR_ON_SUBDIGRAPH_H */
GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT > & operator=(const GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT > &from)
copy operator
GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT > & operator=(GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT > &&from)
move operator
STRUCT_CONSTRAINT & constraint() const noexcept
returns the constraint that is used by the generator
The basic class for computing the next graph changes possible in a structure learning algorithm...
INLINE void emplace(Args &&... args)
Definition: set_tpl.h:643
void eraseTarget(NodeId node)
removes a target
GraphChangesGeneratorOnSubDiGraph(STRUCT_CONSTRAINT &constraint)
default constructor
void eraseTail(NodeId node)
removes a tail node
const iterator & end() const
returns an (unsafe) iterator on the end of the list of operators
void setTails(const NodeSet &nodes)
assign a set of "tail" nodes
void clearChanges() noexcept
empty the set of possible change operators that can be applied
Size _max_threads_number_
the max number of threads authorized
Set< GraphChange > legal_changes_
the current set of operators
void setGraph(const DiGraph &graph)
sets a new graph from which the operator will compute possible changes
iterator begin() const
returns an (unsafe) iterator on the beginning of the list of operators
void modifyGraph(const GraphChange &change)
notify the operator set of a change applied to the graph
NodeSet tail_nodes_
the tail nodes (other extremities than the targets)
void createChanges_()
create the set of legal and illegal changes from a given graph
void setMaxNbThreads(Size nb) noexcept
sets the maximum number of threads used to compute the set of changes
void setTails(Size nb_nodes)
assign a set of "tail" nodes from 0 to nb_nodes - 1
void setTargets(const NodeSet &nodes)
assign a set of target nodes
void addTarget(NodeId node)
adds a new target node
Database(const std::string &filename, const BayesNet< GUM_SCALAR > &bn, const std::vector< std::string > &missing_symbols)
STRUCT_CONSTRAINT * constraint_
a reference on the structural constraint used to restrict the changes
void addTail(NodeId node)
adds a new "tail" node
GraphChangesGeneratorOnSubDiGraph(const GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT > &from)
copy constructor
void notifyGetCompleted()
notifies the generator that we have parsed all its legal changes
GraphChangesGeneratorOnSubDiGraph(GraphChangesGeneratorOnSubDiGraph< STRUCT_CONSTRAINT > &&from)
move operator