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aGrUM
0.20.3
a C++ library for (probabilistic) graphical models
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The greedy hill climbing learning algorithm (for directed graphs) More...
#include <greedyHillClimbing.h>
Public Attributes | |
Signaler3< Size, double, double > | onProgress |
Progression, error and time. More... | |
Signaler1< std::string > | onStop |
Criteria messageApproximationScheme. More... | |
Public Member Functions | |
Constructors / Destructors | |
GreedyHillClimbing () | |
default constructor More... | |
GreedyHillClimbing (const GreedyHillClimbing &from) | |
copy constructor More... | |
GreedyHillClimbing (GreedyHillClimbing &&from) | |
move constructor More... | |
~GreedyHillClimbing () | |
destructor More... | |
Operators | |
GreedyHillClimbing & | operator= (const GreedyHillClimbing &from) |
copy operator More... | |
GreedyHillClimbing & | operator= (GreedyHillClimbing &&from) |
move operator More... | |
Accessors / Modifiers | |
ApproximationScheme & | approximationScheme () |
returns the approximation policy of the learning algorithm More... | |
template<typename GRAPH_CHANGES_SELECTOR > | |
DAG | learnStructure (GRAPH_CHANGES_SELECTOR &selector, DAG initial_dag=DAG()) |
learns the structure of a Bayes net More... | |
template<typename GUM_SCALAR = double, typename GRAPH_CHANGES_SELECTOR , typename PARAM_ESTIMATOR > | |
BayesNet< GUM_SCALAR > | learnBN (GRAPH_CHANGES_SELECTOR &selector, PARAM_ESTIMATOR &estimator, DAG initial_dag=DAG()) |
learns the structure and the parameters of a BN More... | |
Getters and setters | |
void | setEpsilon (double eps) |
Given that we approximate f(t), stopping criterion on |f(t+1)-f(t)|. More... | |
double | epsilon () const |
Returns the value of epsilon. More... | |
void | disableEpsilon () |
Disable stopping criterion on epsilon. More... | |
void | enableEpsilon () |
Enable stopping criterion on epsilon. More... | |
bool | isEnabledEpsilon () const |
Returns true if stopping criterion on epsilon is enabled, false otherwise. More... | |
void | setMinEpsilonRate (double rate) |
Given that we approximate f(t), stopping criterion on d/dt(|f(t+1)-f(t)|). More... | |
double | minEpsilonRate () const |
Returns the value of the minimal epsilon rate. More... | |
void | disableMinEpsilonRate () |
Disable stopping criterion on epsilon rate. More... | |
void | enableMinEpsilonRate () |
Enable stopping criterion on epsilon rate. More... | |
bool | isEnabledMinEpsilonRate () const |
Returns true if stopping criterion on epsilon rate is enabled, false otherwise. More... | |
void | setMaxIter (Size max) |
Stopping criterion on number of iterations. More... | |
Size | maxIter () const |
Returns the criterion on number of iterations. More... | |
void | disableMaxIter () |
Disable stopping criterion on max iterations. More... | |
void | enableMaxIter () |
Enable stopping criterion on max iterations. More... | |
bool | isEnabledMaxIter () const |
Returns true if stopping criterion on max iterations is enabled, false otherwise. More... | |
void | setMaxTime (double timeout) |
Stopping criterion on timeout. More... | |
double | maxTime () const |
Returns the timeout (in seconds). More... | |
double | currentTime () const |
Returns the current running time in second. More... | |
void | disableMaxTime () |
Disable stopping criterion on timeout. More... | |
void | enableMaxTime () |
Enable stopping criterion on timeout. More... | |
bool | isEnabledMaxTime () const |
Returns true if stopping criterion on timeout is enabled, false otherwise. More... | |
void | setPeriodSize (Size p) |
How many samples between two stopping is enable. More... | |
Size | periodSize () const |
Returns the period size. More... | |
void | setVerbosity (bool v) |
Set the verbosity on (true) or off (false). More... | |
bool | verbosity () const |
Returns true if verbosity is enabled. More... | |
ApproximationSchemeSTATE | stateApproximationScheme () const |
Returns the approximation scheme state. More... | |
Size | nbrIterations () const |
Returns the number of iterations. More... | |
const std::vector< double > & | history () const |
Returns the scheme history. More... | |
void | initApproximationScheme () |
Initialise the scheme. More... | |
bool | startOfPeriod () |
Returns true if we are at the beginning of a period (compute error is mandatory). More... | |
void | updateApproximationScheme (unsigned int incr=1) |
Update the scheme w.r.t the new error and increment steps. More... | |
Size | remainingBurnIn () |
Returns the remaining burn in. More... | |
void | stopApproximationScheme () |
Stop the approximation scheme. More... | |
bool | continueApproximationScheme (double error) |
Update the scheme w.r.t the new error. More... | |
Getters and setters | |
std::string | messageApproximationScheme () const |
Returns the approximation scheme message. More... | |
Public Types | |
enum | ApproximationSchemeSTATE : char { ApproximationSchemeSTATE::Undefined, ApproximationSchemeSTATE::Continue, ApproximationSchemeSTATE::Epsilon, ApproximationSchemeSTATE::Rate, ApproximationSchemeSTATE::Limit, ApproximationSchemeSTATE::TimeLimit, ApproximationSchemeSTATE::Stopped } |
The different state of an approximation scheme. More... | |
Protected Attributes | |
double | current_epsilon_ |
Current epsilon. More... | |
double | last_epsilon_ |
Last epsilon value. More... | |
double | current_rate_ |
Current rate. More... | |
Size | current_step_ |
The current step. More... | |
Timer | timer_ |
The timer. More... | |
ApproximationSchemeSTATE | current_state_ |
The current state. More... | |
std::vector< double > | history_ |
The scheme history, used only if verbosity == true. More... | |
double | eps_ |
Threshold for convergence. More... | |
bool | enabled_eps_ |
If true, the threshold convergence is enabled. More... | |
double | min_rate_eps_ |
Threshold for the epsilon rate. More... | |
bool | enabled_min_rate_eps_ |
If true, the minimal threshold for epsilon rate is enabled. More... | |
double | max_time_ |
The timeout. More... | |
bool | enabled_max_time_ |
If true, the timeout is enabled. More... | |
Size | max_iter_ |
The maximum iterations. More... | |
bool | enabled_max_iter_ |
If true, the maximum iterations stopping criterion is enabled. More... | |
Size | burn_in_ |
Number of iterations before checking stopping criteria. More... | |
Size | period_size_ |
Checking criteria frequency. More... | |
bool | verbosity_ |
If true, verbosity is enabled. More... | |
The greedy hill climbing learning algorithm (for directed graphs)
The GreedyHillClimbing class implements a greedy search in which the only the graph changes that increase the global score are applied. Those that increase it the more are applied first. The algorithm stops when no single change can increase the score anymore.
Definition at line 58 of file greedyHillClimbing.h.
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stronginherited |
The different state of an approximation scheme.
Enumerator | |
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Undefined | |
Continue | |
Epsilon | |
Rate | |
Limit | |
TimeLimit | |
Stopped |
Definition at line 64 of file IApproximationSchemeConfiguration.h.
gum::learning::GreedyHillClimbing::GreedyHillClimbing | ( | ) |
default constructor
Definition at line 35 of file greedyHillClimbing.cpp.
References gum::learning::genericBNLearner::Database::Database().
gum::learning::GreedyHillClimbing::GreedyHillClimbing | ( | const GreedyHillClimbing & | from | ) |
copy constructor
Definition at line 44 of file greedyHillClimbing.cpp.
References gum::learning::genericBNLearner::Database::Database().
gum::learning::GreedyHillClimbing::GreedyHillClimbing | ( | GreedyHillClimbing && | from | ) |
move constructor
Definition at line 50 of file greedyHillClimbing.cpp.
References gum::learning::genericBNLearner::Database::Database().
gum::learning::GreedyHillClimbing::~GreedyHillClimbing | ( | ) |
destructor
Definition at line 56 of file greedyHillClimbing.cpp.
References gum::learning::genericBNLearner::Database::Database().
ApproximationScheme & gum::learning::GreedyHillClimbing::approximationScheme | ( | ) |
returns the approximation policy of the learning algorithm
Definition at line 71 of file greedyHillClimbing.cpp.
Update the scheme w.r.t the new error.
Test the stopping criterion that are enabled.
error | The new error value. |
OperationNotAllowed | Raised if state != ApproximationSchemeSTATE::Continue. |
Definition at line 208 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the current running time in second.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 115 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Disable stopping criterion on epsilon.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 53 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Disable stopping criterion on max iterations.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 94 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Disable stopping criterion on timeout.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 118 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Disable stopping criterion on epsilon rate.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 74 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Enable stopping criterion on epsilon.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 56 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Enable stopping criterion on max iterations.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 97 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Enable stopping criterion on timeout.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 121 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Enable stopping criterion on epsilon rate.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 77 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the value of epsilon.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 50 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the scheme history.
OperationNotAllowed | Raised if the scheme did not performed or if verbosity is set to false. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 157 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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inherited |
Initialise the scheme.
Definition at line 168 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns true if stopping criterion on epsilon is enabled, false otherwise.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 60 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns true if stopping criterion on max iterations is enabled, false otherwise.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 101 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns true if stopping criterion on timeout is enabled, false otherwise.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 125 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns true if stopping criterion on epsilon rate is enabled, false otherwise.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 81 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
BayesNet< GUM_SCALAR > gum::learning::GreedyHillClimbing::learnBN | ( | GRAPH_CHANGES_SELECTOR & | selector, |
PARAM_ESTIMATOR & | estimator, | ||
DAG | initial_dag = DAG() |
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) |
learns the structure and the parameters of a BN
selector | A selector class that computes the best changes that can be applied and that enables the user to get them very easily. Typically, the selector is a GraphChangesSelector4DiGraph<SCORE, STRUCT_CONSTRAINT, GRAPH_CHANGES_GENERATOR>. |
estimator | A estimator. |
initial_dag | the DAG we start from for our learning |
Definition at line 128 of file greedyHillClimbing_tpl.h.
References gum::learning::genericBNLearner::Database::Database().
DAG gum::learning::GreedyHillClimbing::learnStructure | ( | GRAPH_CHANGES_SELECTOR & | selector, |
DAG | initial_dag = DAG() |
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) |
learns the structure of a Bayes net
selector | A selector class that computes the best changes that can be applied and that enables the user to get them very easily. Typically, the selector is a GraphChangesSelector4DiGraph<SCORE, STRUCT_CONSTRAINT, GRAPH_CHANGES_GENERATOR>. |
initial_dag | the DAG we start from for our learning |
Definition at line 37 of file greedyHillClimbing_tpl.h.
References gum::learning::genericBNLearner::Database::Database().
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virtualinherited |
Returns the criterion on number of iterations.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 91 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the timeout (in seconds).
Implements gum::IApproximationSchemeConfiguration.
Definition at line 112 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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inherited |
Returns the approximation scheme message.
Definition at line 38 of file IApproximationSchemeConfiguration_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the value of the minimal epsilon rate.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 71 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the number of iterations.
OperationNotAllowed | Raised if the scheme did not perform. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 148 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
GreedyHillClimbing & gum::learning::GreedyHillClimbing::operator= | ( | const GreedyHillClimbing & | from | ) |
copy operator
Definition at line 59 of file greedyHillClimbing.cpp.
References gum::learning::genericBNLearner::Database::Database().
GreedyHillClimbing & gum::learning::GreedyHillClimbing::operator= | ( | GreedyHillClimbing && | from | ) |
move operator
Definition at line 65 of file greedyHillClimbing.cpp.
References gum::learning::genericBNLearner::Database::Database().
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virtualinherited |
Returns the period size.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 134 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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inherited |
Returns the remaining burn in.
Definition at line 191 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Given that we approximate f(t), stopping criterion on |f(t+1)-f(t)|.
If the criterion was disabled it will be enabled.
eps | The new epsilon value. |
OutOfLowerBound | Raised if eps < 0. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 42 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Stopping criterion on number of iterations.
If the criterion was disabled it will be enabled.
max | The maximum number of iterations. |
OutOfLowerBound | Raised if max <= 1. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 84 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Stopping criterion on timeout.
If the criterion was disabled it will be enabled.
timeout | The timeout value in seconds. |
OutOfLowerBound | Raised if timeout <= 0.0. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 105 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Given that we approximate f(t), stopping criterion on d/dt(|f(t+1)-f(t)|).
If the criterion was disabled it will be enabled
rate | The minimal epsilon rate. |
OutOfLowerBound | if rate<0 |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 63 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
How many samples between two stopping is enable.
p | The new period value. |
OutOfLowerBound | Raised if p < 1. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 128 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Set the verbosity on (true) or off (false).
v | If true, then verbosity is turned on. |
Implements gum::IApproximationSchemeConfiguration.
Definition at line 137 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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inherited |
Returns true if we are at the beginning of a period (compute error is mandatory).
Definition at line 178 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns the approximation scheme state.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 143 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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inherited |
Stop the approximation scheme.
Definition at line 200 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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inherited |
Update the scheme w.r.t the new error and increment steps.
incr | The new increment steps. |
Definition at line 187 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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virtualinherited |
Returns true if verbosity is enabled.
Implements gum::IApproximationSchemeConfiguration.
Definition at line 139 of file approximationScheme_inl.h.
References gum::Set< Key, Alloc >::emplace().
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protectedinherited |
Number of iterations before checking stopping criteria.
Definition at line 413 of file approximationScheme.h.
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protectedinherited |
Current epsilon.
Definition at line 368 of file approximationScheme.h.
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protectedinherited |
Current rate.
Definition at line 374 of file approximationScheme.h.
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protectedinherited |
The current state.
Definition at line 383 of file approximationScheme.h.
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protectedinherited |
The current step.
Definition at line 377 of file approximationScheme.h.
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protectedinherited |
If true, the threshold convergence is enabled.
Definition at line 392 of file approximationScheme.h.
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protectedinherited |
If true, the maximum iterations stopping criterion is enabled.
Definition at line 410 of file approximationScheme.h.
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protectedinherited |
If true, the timeout is enabled.
Definition at line 404 of file approximationScheme.h.
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protectedinherited |
If true, the minimal threshold for epsilon rate is enabled.
Definition at line 398 of file approximationScheme.h.
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protectedinherited |
Threshold for convergence.
Definition at line 389 of file approximationScheme.h.
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protectedinherited |
The scheme history, used only if verbosity == true.
Definition at line 386 of file approximationScheme.h.
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protectedinherited |
Last epsilon value.
Definition at line 371 of file approximationScheme.h.
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protectedinherited |
The maximum iterations.
Definition at line 407 of file approximationScheme.h.
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protectedinherited |
The timeout.
Definition at line 401 of file approximationScheme.h.
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protectedinherited |
Threshold for the epsilon rate.
Definition at line 395 of file approximationScheme.h.
Progression, error and time.
Definition at line 58 of file IApproximationSchemeConfiguration.h.
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inherited |
Criteria messageApproximationScheme.
Definition at line 61 of file IApproximationSchemeConfiguration.h.
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protectedinherited |
Checking criteria frequency.
Definition at line 416 of file approximationScheme.h.
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protectedinherited |
The timer.
Definition at line 380 of file approximationScheme.h.
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protectedinherited |
If true, verbosity is enabled.
Definition at line 419 of file approximationScheme.h.